CDS

Accession Number TCMCG021C15224
gbkey CDS
Protein Id XP_010925221.1
Location complement(join(427625..427708,431601..431679,432034..432153,435468..435568,435783..435929,437511..437606,437703..437825,437925..438068,439232..439363,439427..439597,440141..440305,445625..445702,445796..445925,446033..446223,446319..446391,446477..446532,446643..446801,446976..447089,447165..447257,448996..449196,450939..451016,451099..451185,451269..451350,451431..451543,451625..451775,451946..452064,452151..452348,458245..458368,458646..458765,458873..459003,459826..459969,460046..460147,460471..460677,460750..460866,461959..462120,464646..464735,466009..466236,466335..466457,466592..466674,468495..468654,469031..469141,469284..469388,469508..469582,470362..470457,470547..470687))
Gene LOC105047827
GeneID 105047827
Organism Elaeis guineensis

Protein

Length 1867aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268357
db_source XM_010926919.3
Definition nuclear pore complex protein NUP205 isoform X1 [Elaeis guineensis]

EGGNOG-MAPPER Annotation

COG_category S
Description Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14310        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044611        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTCTCTCCGCACGAGCTCCTCTCGACGATCGAGGCGGCCCTCCTCGGCCCCTCCCCTCCCACTGCGACCCAGAGGATCGAGCTCATGCACGCTATTCGCTCTTCCCTCCCGGCTCTCCGAACCCTCCTCTCCTACCCGAGCCCCAAGGCGTCTGATCGATCTCAGGTCCAATCCAAGGAAATCAGGCTTCCCGATTCATCACCAATCACGCTGGATGACATGGATGTACAGATTGCGTTGAAATTGAGTGATGATCTCAATTTAAATGAAATTGAGTGTGTTCGCTTACTAGTTTCTGCCAATAAAGAGTGGGTTTTACTTGGGCGAGAACCATTGGAGATATTTCGACTTGCAGCAGGCCTCTGGTACATGGAAAGAAGAGATTTGATAACCTCTTTGTACACCCTCTTACGGGCTGTTGTGCTTGACCAGGGGCTGGATGCTGATCTTGTGGCTGACATTCAGAAGCACCTGGAAGATCTATTTACCTCTGGTCTCCGGCAGGGGCTGATTATGCTCATAAAGGAACTAAATCGAGAGGAACCAGCTGGTTTTGGTGGCCCTAATGCTGAACGCTATGTTCTTGACTTCAGAGGTGCTATCGTCCAACGACGAGCTGTTGTTTCTCGGGAAAGATTGAGTCTTAGTCACTGCCTTGTCCTTTCTGTACTTGTTATGCGGATGAGTCCAAAAGATGTAAAGGATGTATTTGAGACCCTAAAAGATTGTGCAGCTGAAGTTGATAGTGATGCCACCGTACAGCTTCAGATAACATTCAGCCTTCTGTTTTCTCTTGTTATTGCTTTTATGTCTGATGCCTTAAGCACAGTTCCCAACAAAGCCTCCACACTATCGCTTGATGCCTCCTTCAGATATGAATTTCATGAATTAGTGATGACTACCGGGAATAATTCCAATGTTGAGGGTTTCGTTGATGGTGTAAGACTTGCATGGACCGTTCATTTGATGTTAACTCAAGATCAAAGTGCTTCAAGAAATACTATCTTGGGTGCTTCATCCAAGGATTTGGCAAATATTTACTCATGTTTGGAACTTGTTTGCTCAAACAACGTTTTCCACTTTTTCTTGGCTAGAGTTCTCCAAGCTGCTGCCTATCAGAATGATGACGAGGACATGGTCTATATGTATAATGGATACATGCATAAATTGATGATGTGCTTTCTTTCGCACCCACTTTCTAGAGACAAGGTGAAGGAAATGAAGGAGAAAGCTATGAGTGTGCTTAGTCCATATAGCTTGTTGGGATCAGATGACTTCAGAGATGACACTTTTAGTGATCCATGGCAAGTGACACAGATGGGTTGTCAGCCATTTGTTTCGCTGTTGGAATTGGTTAGCGAAATTTATCGGAAAGAGCCAGAGCTATTGTATGGGAATGAAGAGTTGTGGACATTTGTAAACTTTGCTGGAGAGGACCATACCAATATACGGACTCTTGTGGCTTTCTTGAGACTGCTTAGTACTCTGGCTTCTGACGAGGAGGGTGCATCAAAAGTTTTTGAGTTACTCCAGGGTAAAATGTTCCGGTCAATAGGTTGGAGTACCTTGTTCGATTGCTTATCTATTTATGAAGATAAGTTCAAACAGTCTCTGCAAACTTCTGGAGCCATGTTGCCTGAATTTGAGGAGGGTTATGCGCAAGCGCTTGTTGCATATTTAGATGTTCTTAAGAAGGTTGTGGAAAATGGAAATCCTATTGAAAGGAAGAAATGGTTTCCGGACATTGAACCCTTATTTAAGCTTCTCAGTTATGAAAATGTGCCTCCATATCTAAAGGGAGCATTGCGGAATGCTATTACTGCTTTCATCAAGGTGTCTCCAGTTCTAAAAGATACTATCTGGAATTACCTTGAGCAATATGATCTTCCTGTAGTTGTTGGTCCTTCAGTTGGTAGTGGTGGGAAGCATGTTGCATCCCAGGTTTATGACATGCGGTTTGAGCTGAATGAAGTTGAAGCAAGGAGGGAAAGATACCCATCTACCATATCTTTTCTTAACTTGGTAAATGCTCTTATTGCAGAAGAGAGAGATGTCAGTGACAGAGGCCGAAGGTTTATGGGGATCTTCAGATTTGTTTATGATCATGTGTTTGGGCCTTTTCCCCAGAGAGCCTATGGCGATCTTAGTGAAAAGTGGCAATTAATTCTTGCTTGCCTTCAGCACTTCCGAATGGTTTTGAGCATGTATGATATCAAGGATGAAGATATTAGCAGTGCTGTCGACATGTCTCAGCCTTCAGCCATGGCACATGTCTCCCCACTTGAGAACCAGCTCCCTGTGCTGGAACTGCTGAAAGATTTTATGAGTGGTAAAATTGTTTTCCGCAATATAATGAGTATCATTTTATTGGGGGTCAACACTATAGTTAATGAGCGGAGTAGCCAAACATATGGCCAACTATTGGAGAAAGCTGTGCACCTTTCACTGGAAATAATTATTCTTGTTATGGAAAAGGATTTGTTTCTTGCTGATTTCTGGCGCCCATTATATCAGCCTTTGGATATTATTTTATGTCAAGATCATAACCAAATTGTTGCATTGCTGGAGTATGTACGATATGATTTTCTACCTCAAATTCAGCATTGTTCAATAAAGATCATGAGTATTCTTAGTTCTAGATTGGTTGGCCTCGTACAGTTATTGTTGAAATCAAGTGCAGCAAAATGCCTGATTGAGGATTTTGCAACCTGTTTGGAGTTACGTTTTGATGAGTATCAGGTTATAGAGAACACAAAAGATGATGTTGGCATTCTTATATTGCAGCTTCTTATTGATAATATTGGTCGCCCAGCACCAAATATCACACATTTGCTTCTTAGGTTTGATGTTGATATTCCTGTGGAGCAGACAGTATTGCAGCCAAAAGTTCATTACAGTTGTTTGAAAGTAATTCTTGATAACTTGGAAAAGCTTTCAAAGCCAGATATAAATGCTTTACTGCATGAGTTTGGTTTTCAGCTTCTGTATGAATTATGCCTGGACCCCCTAACCAGTGGGCCAGTAATGGATCTTTTGAGTACAAAGAAATACCAGTTCTTTTCTAAGCACTTGGAAACAATTGGTGTTGCTCCACTCCCCAAAAGGAGCAACAATCAGGCACTTCGCATTAGCTCTCTTCATCAGAGGGCATGGCTGCTTAAATTATTAACATTGGAGTTGCATTTAGCTGATATGGCTGTATCCACACACCGAGAAACATGCTTGGCGATTCTTTCCCAGATTTTTGTTCAGTGTTCTGATGAGATTTTTGGAAGTCCAAATGTGTCTCAAACCAATGATGCAGATGCTAATCATGCTGGAAATAGAACTTTTAATAAGCGGAAGGCATTAGAATTGCTTGAAATTGTCCAGTTCAGATCTCCTGATAGAGCTATGAAATATCCTCAATTCCTTTCTAGTTTGAAATATGACACAAAGGTTGATGATATACTCAGAAATTCTGCGACATCTGAAATGGGTGGTGTGTATTATTATTCTGAACGAGGTGATCGACTAATCGACCTTGATGCATTTCATGACAAGCTCTGGCAGACATTCGCGCAAGTGGGCTCCCATTTTAATGAGGCTGAGAAAGGTGAGCTAAGAGAATCAATCCAGCAGTTGTTAAGATGGGCTTGGAGGTATAACAAAAATCTTGAAGAGCAAGCAGCCCAGCTTCATATGCTGACTGGCTGGTCCCAGATTGTAGAGGTTCCTATATCTCGGAGAATGTCACTTCTTGAAGATCGCTCTCAGATATTGTTTGAGTTGCTTGGTGCTTCATTGAGTGCATCGGCATCTCCAGATTGTTCATTAAAGATGGCAGTAATATTAAGCCATGTTGCGCTCACCTGCATGGCGAAACTTCGAGATGAGAGATTCTTATGTCCTGGTGGTGTAGATTCTGACAGTGTAACGTGCCTTGATATTATCTCGGTGAAGCAATTGTCAAATGGAGCTTGTCATTCTATACTTTTTAAGCTTATGATGGCTATTCTCAGAAATGAATCATCAGAAGCCTTGAGAAGGCGCCAATATGCACTACTGCTGAGTTATTTTCAATACTGTCGGAGTATTCTTGACCCTGATATCCCCGCATCAGTCTTGCATTTCTTGCTTCATGAGGAACAAGATGGAGATGAAGAACTTAATCTACAAAAGATTGACAAGGAGCAGGCTGAACTTGAGCGGGCCAATTTTTCCATAATAAGAAAAGAGGCTGAAGCAATAATTGATTTGGTGACAAAGGATGCCATGCAAGGCAGTGAAGCTGGAAAGGCAATATCATTTTATGTTTTAGATGCATTTATTAATATAGACCAAGAAAAGTTCTTCTTAAATCAACTTCAAAGTAGAGGAATTTTAAGGTCATGCTTCATGGAAATCAGTAATTTTTCTTGCAAGGATGGCGGGTGCTCATTGGAGTCTTTGCAACGTTTGTGTACTCTTGAGGCTCAAATTTCTTTGTTGTTGAGAATCAGCCACAACTATGGAAAGCATGGTGCTCAGATTCTGTTATCTATGGGTGCCTTGGAGCATCTTGCCTCATGCAGGGCCATGAGTTTGCCAACCAAGGCAAGGTGGGTTGGCTCCAACATGGGCAGAGATCGAGCTGGAGAAGCTGATAAACAGAGGTTGCTGGTAACACCAATACTGAGATTGGTTTCAAGCCTGACATCTCTGGTGGATTCATCAGAATTTTTAGAGGTGAAGAACAAAATTGTGCGCGAAGTTATAGATTTTGTCAAGGCACACCAGTCAATTTTTGATCAAATTTTCAGAGAGGATGTCACAGGAGCTGATGAATTGACCTTAGAGCGGATTAATCTCATTGCCTCTATACTAGGCAAGGTTTGGCCATATGAGGAATATGATGAGTGTGGCTTGTCTCAAAAACTTTTTGCAATGATGCATTTTCTTTTCCGTCTTGATGGTATCTCTTCCAGTTTTATTCACTCTTCAGAATCTATTGAGAACCAAAAGAAGTTAGAGTTGGTAATCTTTCAGCTATGCTTTAGCCTGAGCTCTTACCTTTATTTTCTGATCACAAAGAAGCTTATTTGTTTGCGGGTTTCGGATGGTCCTGGTGATCCTAGTGAACCTGGTCGGCAGCGGCAACCGCAGCAGCTCACACTAAATTTACTACTGGACCTTCTTAGTTTAGTAACGGCTGCTTTGGAGAGAGCGGGTGAAGAAAAATTCTTGTTACTTAACAAGATTCAAGACATTAATGAACTATCAAGACACGATGTTGATGAAATCATCAATGCATGTATGAGACAAGATTGCATCTCTTCTTATGATAATATCCGGAAAAGGAGGTACATTGCAATGCTAGAAATGTGCCACATGGCTGGGAACAGGGATCAACTAATTGCTCTTTTGCTTCAGCTTGCCGAGCGTGTCCTTAACATCCTTCTCATTCATTTTCAGGATGATAATACTGATTCACAAGATCTTTCTTTGCTGTGTGGGAATTTGCATGCAATTTTAGAAAGAATCGAGCAATTAAGAGAGGAGAAAATTGGTCGTGGTCTGAAGTCGTTCCAGAGACTTGTGAGCACACTGAAGGAAATGTCAATTCGGAAGATGGCTCTCTAA
Protein:  
MVSPHELLSTIEAALLGPSPPTATQRIELMHAIRSSLPALRTLLSYPSPKASDRSQVQSKEIRLPDSSPITLDDMDVQIALKLSDDLNLNEIECVRLLVSANKEWVLLGREPLEIFRLAAGLWYMERRDLITSLYTLLRAVVLDQGLDADLVADIQKHLEDLFTSGLRQGLIMLIKELNREEPAGFGGPNAERYVLDFRGAIVQRRAVVSRERLSLSHCLVLSVLVMRMSPKDVKDVFETLKDCAAEVDSDATVQLQITFSLLFSLVIAFMSDALSTVPNKASTLSLDASFRYEFHELVMTTGNNSNVEGFVDGVRLAWTVHLMLTQDQSASRNTILGASSKDLANIYSCLELVCSNNVFHFFLARVLQAAAYQNDDEDMVYMYNGYMHKLMMCFLSHPLSRDKVKEMKEKAMSVLSPYSLLGSDDFRDDTFSDPWQVTQMGCQPFVSLLELVSEIYRKEPELLYGNEELWTFVNFAGEDHTNIRTLVAFLRLLSTLASDEEGASKVFELLQGKMFRSIGWSTLFDCLSIYEDKFKQSLQTSGAMLPEFEEGYAQALVAYLDVLKKVVENGNPIERKKWFPDIEPLFKLLSYENVPPYLKGALRNAITAFIKVSPVLKDTIWNYLEQYDLPVVVGPSVGSGGKHVASQVYDMRFELNEVEARRERYPSTISFLNLVNALIAEERDVSDRGRRFMGIFRFVYDHVFGPFPQRAYGDLSEKWQLILACLQHFRMVLSMYDIKDEDISSAVDMSQPSAMAHVSPLENQLPVLELLKDFMSGKIVFRNIMSIILLGVNTIVNERSSQTYGQLLEKAVHLSLEIIILVMEKDLFLADFWRPLYQPLDIILCQDHNQIVALLEYVRYDFLPQIQHCSIKIMSILSSRLVGLVQLLLKSSAAKCLIEDFATCLELRFDEYQVIENTKDDVGILILQLLIDNIGRPAPNITHLLLRFDVDIPVEQTVLQPKVHYSCLKVILDNLEKLSKPDINALLHEFGFQLLYELCLDPLTSGPVMDLLSTKKYQFFSKHLETIGVAPLPKRSNNQALRISSLHQRAWLLKLLTLELHLADMAVSTHRETCLAILSQIFVQCSDEIFGSPNVSQTNDADANHAGNRTFNKRKALELLEIVQFRSPDRAMKYPQFLSSLKYDTKVDDILRNSATSEMGGVYYYSERGDRLIDLDAFHDKLWQTFAQVGSHFNEAEKGELRESIQQLLRWAWRYNKNLEEQAAQLHMLTGWSQIVEVPISRRMSLLEDRSQILFELLGASLSASASPDCSLKMAVILSHVALTCMAKLRDERFLCPGGVDSDSVTCLDIISVKQLSNGACHSILFKLMMAILRNESSEALRRRQYALLLSYFQYCRSILDPDIPASVLHFLLHEEQDGDEELNLQKIDKEQAELERANFSIIRKEAEAIIDLVTKDAMQGSEAGKAISFYVLDAFINIDQEKFFLNQLQSRGILRSCFMEISNFSCKDGGCSLESLQRLCTLEAQISLLLRISHNYGKHGAQILLSMGALEHLASCRAMSLPTKARWVGSNMGRDRAGEADKQRLLVTPILRLVSSLTSLVDSSEFLEVKNKIVREVIDFVKAHQSIFDQIFREDVTGADELTLERINLIASILGKVWPYEEYDECGLSQKLFAMMHFLFRLDGISSSFIHSSESIENQKKLELVIFQLCFSLSSYLYFLITKKLICLRVSDGPGDPSEPGRQRQPQQLTLNLLLDLLSLVTAALERAGEEKFLLLNKIQDINELSRHDVDEIINACMRQDCISSYDNIRKRRYIAMLEMCHMAGNRDQLIALLLQLAERVLNILLIHFQDDNTDSQDLSLLCGNLHAILERIEQLREEKIGRGLKSFQRLVSTLKEMSIRKMAL